It sounds like the P.O. hacked up the wiring harness just to make it work, rather than fixing whatever was the actual problem. I would suggest finding/getting the wiring diagram and then working on one electrical issue at a time (by either fixing and/or restoring a given circuit to it's original configuration). Tedious, but it sounds like this is a new-to-you tractor that you want to use for some time, and doing it gets the tractor back to a known, reliable electrical system.